[INFO] fetching crate openmm-sys 7.4.1...
[INFO] checking openmm-sys-7.4.1 against try#72f88fc4e9458f89516a0b8b0868f3718aec5b47 for pr-74989
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain 72f88fc4e9458f89516a0b8b0868f3718aec5b47
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+72f88fc4e9458f89516a0b8b0868f3718aec5b47" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+72f88fc4e9458f89516a0b8b0868f3718aec5b47" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+72f88fc4e9458f89516a0b8b0868f3718aec5b47" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a62d20e87b9a9547a45ae62da80e2d54c5f8a0cf30798b25e5b96af24d03ed9a
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "a62d20e87b9a9547a45ae62da80e2d54c5f8a0cf30798b25e5b96af24d03ed9a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a62d20e87b9a9547a45ae62da80e2d54c5f8a0cf30798b25e5b96af24d03ed9a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a62d20e87b9a9547a45ae62da80e2d54c5f8a0cf30798b25e5b96af24d03ed9a", kill_on_drop: false }`
[INFO] [stdout] a62d20e87b9a9547a45ae62da80e2d54c5f8a0cf30798b25e5b96af24d03ed9a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+72f88fc4e9458f89516a0b8b0868f3718aec5b47" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fd4485b514e1811f4a3a9a6cc9d8b25a1177ea95f62a328584135ed7a7058815
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "fd4485b514e1811f4a3a9a6cc9d8b25a1177ea95f62a328584135ed7a7058815", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-7847ba32c30c918c/build-script-build` (exit code: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-35f74256ee8afbdf/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python (found version "2.7.18") 
[INFO] [stderr]   -- The C compiler identification is GNU 9.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 9.3.0
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc -- works
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ -- works
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/openmm-sys-35f74256ee8afbdf/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.16/Modules/FindPackageHandleStandardArgs.cmake:146 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.16/Modules/FindPackageHandleStandardArgs.cmake:393 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.16/Modules/FindDoxygen.cmake:633 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at '
[INFO] [stderr]   command did not execute successfully, got: exit code: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.44/src/lib.rs:885:5
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5571fa34ccf0 - std::backtrace_rs::backtrace::libunwind::trace::h452faf99f32e7c93
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/../../backtrace/src/backtrace/libunwind.rs:96
[INFO] [stderr]      1:     0x5571fa34ccf0 - std::backtrace_rs::backtrace::trace_unsynchronized::he40edc71437667a1
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/../../backtrace/src/backtrace/mod.rs:66
[INFO] [stderr]      2:     0x5571fa34ccf0 - std::sys_common::backtrace::_print_fmt::h6c51d6ade71f46bf
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/sys_common/backtrace.rs:79
[INFO] [stderr]      3:     0x5571fa34ccf0 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h3cd15d7003dec37a
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/sys_common/backtrace.rs:58
[INFO] [stderr]      4:     0x5571fa36c99c - core::fmt::write::h1857a60b204f1b6a
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/core/src/fmt/mod.rs:1080
[INFO] [stderr]      5:     0x5571fa349697 - std::io::Write::write_fmt::hac61caff894c35ae
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/io/mod.rs:1517
[INFO] [stderr]      6:     0x5571fa34f4a0 - std::sys_common::backtrace::_print::haa2f390fb7957e3e
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/sys_common/backtrace.rs:61
[INFO] [stderr]      7:     0x5571fa34f4a0 - std::sys_common::backtrace::print::h48c7cbbad9013bb1
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/sys_common/backtrace.rs:48
[INFO] [stderr]      8:     0x5571fa34f4a0 - std::panicking::default_hook::{{closure}}::h8b7ff05a31e71d55
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:208
[INFO] [stderr]      9:     0x5571fa34f1ec - std::panicking::default_hook::h2f00c78800d98e4c
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:227
[INFO] [stderr]     10:     0x5571fa34fb03 - std::panicking::rust_panic_with_hook::h4eaa635e4694aef3
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:577
[INFO] [stderr]     11:     0x5571fa34f6d9 - std::panicking::begin_panic_handler::{{closure}}::hec242f1b136b5ff2
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:484
[INFO] [stderr]     12:     0x5571fa34d15c - std::sys_common::backtrace::__rust_end_short_backtrace::h1f3cc383ee6c0374
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/sys_common/backtrace.rs:153
[INFO] [stderr]     13:     0x5571fa34f699 - rust_begin_unwind
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:483
[INFO] [stderr]     14:     0x5571fa34f64b - std::panicking::begin_panic_fmt::hebfdcd945bbd27b1
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:437
[INFO] [stderr]     15:     0x5571fa2e18a7 - cmake::fail::h1926688173feff39
[INFO] [stderr]     16:     0x5571fa2e1206 - cmake::run::h6fa6bd5826ca7e4a
[INFO] [stderr]     17:     0x5571fa2dcefc - cmake::Config::build::h5a94162c81b8d736
[INFO] [stderr]     18:     0x5571fa2d79c8 - build_script_build::main::hed4318c25ec1ef66
[INFO] [stderr]     19:     0x5571fa2d9be3 - core::ops::function::FnOnce::call_once::h7c3bacc344dc9080
[INFO] [stderr]     20:     0x5571fa2d98e9 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3f78d9ca57812830
[INFO] [stderr]     21:     0x5571fa2d8569 - std::rt::lang_start::{{closure}}::haaeb53c37cfab26a
[INFO] [stderr]     22:     0x5571fa34ff01 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hecc21eb9018cc197
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/core/src/ops/function.rs:259
[INFO] [stderr]     23:     0x5571fa34ff01 - std::panicking::try::do_call::h174ad655d084b5c7
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:381
[INFO] [stderr]     24:     0x5571fa34ff01 - std::panicking::try::h479e6054ce28de10
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panicking.rs:345
[INFO] [stderr]     25:     0x5571fa34ff01 - std::panic::catch_unwind::hb558ddea2b3e9c45
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/panic.rs:382
[INFO] [stderr]     26:     0x5571fa34ff01 - std::rt::lang_start_internal::h163149047f0a8b61
[INFO] [stderr]                                  at /rustc/72f88fc4e9458f89516a0b8b0868f3718aec5b47/library/std/src/rt.rs:51
[INFO] [stderr]     27:     0x5571fa2d8548 - std::rt::lang_start::h92ae6c38b7978676
[INFO] [stderr]     28:     0x5571fa2d7b2b - main
[INFO] [stderr]     29:     0x7f019ee9b0b3 - __libc_start_main
[INFO] [stderr]     30:     0x5571fa2d40ce - _start
[INFO] [stderr]     31:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "fd4485b514e1811f4a3a9a6cc9d8b25a1177ea95f62a328584135ed7a7058815", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fd4485b514e1811f4a3a9a6cc9d8b25a1177ea95f62a328584135ed7a7058815", kill_on_drop: false }`
[INFO] [stdout] fd4485b514e1811f4a3a9a6cc9d8b25a1177ea95f62a328584135ed7a7058815
